Detailed information of SNP:
SNP ID:
sf0706184611(Gbrowse)
Chromosome: chr07 Position: 6184611 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
---|---|---|---|
All | 1417 | 97.18% | 2.82% |
All Indica | 799 | 99.62% | 0.38% |
All Japonica | 495 | 92.73% | 7.27% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 98.59% | 1.41% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 333 | 99.70% | 0.30% |
Tropical Japonica | 94 | 63.83% | 36.17% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0706184611 | A->C | INTERGENIC | None |