Detailed information of SNP:
|
SNP ID:
sf0114363636(Gbrowse)
Chromosome: chr01 Position: 14363636 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1352 | 97.93% | 2.07% |
| All Indica | 798 | 100.00% | 0.00% |
| All Japonica | 433 | 93.76% | 6.24% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 100.00% | 0.00% |
| Temperate Japonica | 283 | 90.46% | 9.54% |
| Tropical Japonica | 87 | 100.00% | 0.00% |
| Japonica Intermediate | 63 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0114363636 | G->A | INTERGENIC | None |