Detailed information of SNP:



SNP ID: sf0130136811(Gbrowse)

Chromosome: chr01

Position: 30136811
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 62.60% 37.40%
All Indica798 38.97% 61.03%
All Japonica497 99.60% 0.40%
Aus67 70.15% 29.85%
Indica I374 59.63% 40.37%
Indica II213 2.82% 97.18%
Indica Intermediate211 38.86% 61.14%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 92.86% 7.14%
Intermediate41 51.22% 48.78%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0130136811 G->A INTERGENIC None