Detailed information of SNP:
|
SNP ID:
sf0132047913(Gbrowse)
Chromosome: chr01 Position: 32047913 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1392 | 98.28% | 1.72% |
| All Indica | 793 | 97.73% | 2.27% |
| All Japonica | 476 | 98.74% | 1.26% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 98.40% | 1.60% |
| Indica II | 212 | 97.64% | 2.36% |
| Indica Intermediate | 207 | 96.62% | 3.38% |
| Temperate Japonica | 314 | 98.09% | 1.91% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0132047913 | T->G | INTERGENIC | None |