Detailed information of SNP:



SNP ID: sf0132116238(Gbrowse)

Chromosome: chr01

Position: 32116238
Major allele: G

Minor allele: C

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of C(minor allele)
All1419 72.87% 27.13%
All Indica799 54.69% 45.31%
All Japonica497 100.00% 0.00%
Aus67 70.15% 29.85%
Indica I375 40.27% 59.73%
Indica II213 92.96% 7.04%
Indica Intermediate211 41.71% 58.29%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0132116238 G->C INTERGENIC None