Detailed information of SNP:



SNP ID: sf0133069877(Gbrowse)

Chromosome: chr01

Position: 33069877
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 96.40% 3.60%
All Indica799 100.00% 0.00%
All Japonica496 89.92% 10.08%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 88.36% 11.64%
Tropical Japonica93 100.00% 0.00%
Japonica Intermediate68 83.82% 16.18%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0133069877 G->A INTERGENIC None