Detailed information of SNP:



SNP ID: sf0133256031(Gbrowse)

Chromosome: chr01

Position: 33256031
Major allele: T

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1200 57.83% 42.17%
All Indica588 96.09% 3.91%
All Japonica494 8.70% 91.30%
Aus67 100.00% 0.00%
Indica I334 96.11% 3.89%
Indica II96 96.88% 3.12%
Indica Intermediate158 95.57% 4.43%
Temperate Japonica333 11.71% 88.29%
Tropical Japonica93 0.00% 100.00%
Japonica Intermediate68 5.88% 94.12%
Group VI/Aromatic13 0.00% 100.00%
Intermediate38 50.00% 50.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0133256031 G->T INTERGENIC None