Detailed information of SNP:



SNP ID: sf0133340482(Gbrowse)

Chromosome: chr01

Position: 33340482
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1412 80.17% 19.83%
All Indica792 65.78% 34.22%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 88.53% 11.47%
Indica II208 15.38% 84.62%
Indica Intermediate209 75.12% 24.88%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0133340482 G->A INTERGENIC None