Detailed information of SNP:
|
SNP ID:
sf0134091849(Gbrowse)
Chromosome: chr01 Position: 34091849 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1368 | 94.08% | 5.92% |
| All Indica | 750 | 89.20% | 10.80% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 333 | 77.18% | 22.82% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 205 | 97.56% | 2.44% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0134091849 | G->A | INTERGENIC | None |