Detailed information of SNP:



SNP ID: sf0134494228(Gbrowse)

Chromosome: chr01

Position: 34494228
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1419 92.60% 7.40%
All Indica799 100.00% 0.00%
All Japonica497 82.09% 17.91%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 93.43% 6.57%
Tropical Japonica94 70.21% 29.79%
Japonica Intermediate68 42.65% 57.35%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0134494228 G->T INTERGENIC None