Detailed information of SNP:
|
SNP ID:
sf0134967202(Gbrowse)
Chromosome: chr01 Position: 34967202 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1309 | 91.44% | 8.56% |
| All Indica | 694 | 84.29% | 15.71% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 317 | 68.77% | 31.23% |
| Indica II | 178 | 100.00% | 0.00% |
| Indica Intermediate | 199 | 94.97% | 5.03% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 94.59% | 5.41% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0134967202 | G->A | INTERGENIC | None |