Detailed information of SNP:



SNP ID: sf0141766206(Gbrowse)

Chromosome: chr01

Position: 41766206
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 77.63% 22.37%
All Indica797 62.23% 37.77%
All Japonica497 98.19% 1.81%
Aus67 100.00% 0.00%
Indica I374 81.02% 18.98%
Indica II212 23.11% 76.89%
Indica Intermediate211 68.25% 31.75%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 91.49% 8.51%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0141766206 G->A INTERGENIC None