Detailed information of SNP:



SNP ID: sf0202784763(Gbrowse)

Chromosome: chr02

Position: 2784763
Major allele: C

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1419 62.86% 37.14%
All Indica799 74.72% 25.28%
All Japonica497 39.44% 60.56%
Aus67 79.10% 20.90%
Indica I375 63.47% 36.53%
Indica II213 83.57% 16.43%
Indica Intermediate211 85.78% 14.22%
Temperate Japonica335 29.25% 70.75%
Tropical Japonica94 81.91% 18.09%
Japonica Intermediate68 30.88% 69.12%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0202784763 G->C INTERGENIC None