Detailed information of SNP:



SNP ID: sf0203470481(Gbrowse)

Chromosome: chr02

Position: 3470481
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 99.01% 0.99%
All Indica799 99.75% 0.25%
All Japonica497 97.59% 2.41%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 94.68% 5.32%
Japonica Intermediate68 94.12% 5.88%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0203470481 G->A INTERGENIC None