Detailed information of SNP:



SNP ID: sf0204738970(Gbrowse)

Chromosome: chr02

Position: 4738970
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 98.10% 1.90%
All Indica799 100.00% 0.00%
All Japonica497 94.97% 5.03%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 94.03% 5.97%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 92.65% 7.35%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0204738970 A->G INTERGENIC None