Detailed information of SNP:
|
SNP ID:
sf0205968700(Gbrowse)
Chromosome: chr02 Position: 5968700 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1388 | 96.18% | 3.82% |
| All Indica | 769 | 93.37% | 6.63% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 356 | 90.73% | 9.27% |
| Indica II | 208 | 96.63% | 3.37% |
| Indica Intermediate | 205 | 94.63% | 5.37% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0205968700 | G->A | INTERGENIC | None |