Detailed information of SNP:
|
SNP ID:
sf0207234669(Gbrowse)
Chromosome: chr02 Position: 7234669 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1317 | 95.29% | 4.71% |
| All Indica | 799 | 99.87% | 0.13% |
| All Japonica | 396 | 84.60% | 15.40% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 245 | 75.92% | 24.08% |
| Tropical Japonica | 91 | 100.00% | 0.00% |
| Japonica Intermediate | 60 | 96.67% | 3.33% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0207234669 | A->G | INTERGENIC | None |