Detailed information of SNP:
|
SNP ID:
sf0207356509(Gbrowse)
Chromosome: chr02 Position: 7356509 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 61.00% | 39.00% |
| All Indica | 799 | 91.49% | 8.51% |
| All Japonica | 497 | 20.32% | 79.68% |
| Aus | 67 | 8.96% | 91.04% |
| Indica I | 375 | 96.00% | 4.00% |
| Indica II | 213 | 82.63% | 17.37% |
| Indica Intermediate | 211 | 92.42% | 7.58% |
| Temperate Japonica | 335 | 22.09% | 77.91% |
| Tropical Japonica | 94 | 13.83% | 86.17% |
| Japonica Intermediate | 68 | 20.59% | 79.41% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 41 | 63.41% | 36.59% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0207356509 | A->G | INTERGENIC | None |