Detailed information of SNP:
|
SNP ID:
sf0207461142(Gbrowse)
Chromosome: chr02 Position: 7461142 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1312 | 87.96% | 12.04% |
| All Indica | 696 | 78.59% | 21.41% |
| All Japonica | 496 | 99.60% | 0.40% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 323 | 75.54% | 24.46% |
| Indica II | 184 | 81.52% | 18.48% |
| Indica Intermediate | 189 | 80.95% | 19.05% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 84.62% | 15.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0207461142 | G->A | INTERGENIC | None |