Detailed information of SNP:
|
SNP ID:
sf0207732986(Gbrowse)
Chromosome: chr02 Position: 7732986 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1368 | 88.74% | 11.26% |
| All Indica | 749 | 89.72% | 10.28% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 20.90% | 79.10% |
| Indica I | 340 | 85.00% | 15.00% |
| Indica II | 209 | 98.09% | 1.91% |
| Indica Intermediate | 200 | 89.00% | 11.00% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 14.29% | 85.71% |
| Intermediate | 41 | 75.61% | 24.39% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0207732986 | G->A | INTERGENIC | None |