Detailed information of SNP:



SNP ID: sf0210463158(Gbrowse)

Chromosome: chr02

Position: 10463158
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 94.64% 5.36%
All Indica799 90.86% 9.14%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 90.67% 9.33%
Indica II213 92.49% 7.51%
Indica Intermediate211 89.57% 10.43%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0210463158 C->T INTERGENIC None