Detailed information of SNP:



SNP ID: sf0211220514(Gbrowse)

Chromosome: chr02

Position: 11220514
Major allele: C

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 65.68% 34.32%
All Indica799 100.00% 0.00%
All Japonica497 6.84% 93.16%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 1.49% 98.51%
Tropical Japonica94 23.40% 76.60%
Japonica Intermediate68 10.29% 89.71%
Group VI/Aromatic14 14.29% 85.71%
Intermediate42 71.43% 28.57%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0211220514 T->C INTERGENIC None