Detailed information of SNP:
|
SNP ID:
sf0213910767(Gbrowse)
Chromosome: chr02 Position: 13910767 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1342 | 83.83% | 16.17% |
| All Indica | 724 | 71.27% | 28.73% |
| All Japonica | 495 | 99.80% | 0.20% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 344 | 75.00% | 25.00% |
| Indica II | 189 | 71.96% | 28.04% |
| Indica Intermediate | 191 | 63.87% | 36.13% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0213910767 | G->A | INTERGENIC | None |