Detailed information of SNP:



SNP ID: sf0214000992(Gbrowse)

Chromosome: chr02

Position: 14000992
Major allele: G

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1416 64.41% 35.59%
All Indica799 99.50% 0.50%
All Japonica496 4.44% 95.56%
Aus67 100.00% 0.00%
Indica I375 99.20% 0.80%
Indica II213 99.53% 0.47%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 2.40% 97.60%
Tropical Japonica94 9.57% 90.43%
Japonica Intermediate68 7.35% 92.65%
Group VI/Aromatic14 14.29% 85.71%
Intermediate40 65.00% 35.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0214000992 T->G INTERGENIC None