Detailed information of SNP:
|
SNP ID:
sf0214087477(Gbrowse)
Chromosome: chr02 Position: 14087477 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1265 | 69.96% | 30.04% |
| All Indica | 798 | 97.87% | 2.13% |
| All Japonica | 351 | 8.26% | 91.74% |
| Aus | 67 | 76.12% | 23.88% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 212 | 95.75% | 4.25% |
| Indica Intermediate | 211 | 98.58% | 1.42% |
| Temperate Japonica | 251 | 6.77% | 93.23% |
| Tropical Japonica | 54 | 14.81% | 85.19% |
| Japonica Intermediate | 46 | 8.70% | 91.30% |
| Group VI/Aromatic | 13 | 7.69% | 92.31% |
| Intermediate | 36 | 63.89% | 36.11% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0214087477 | A->G | INTERGENIC | None |