Detailed information of SNP:
SNP ID:
sf0214118245(Gbrowse)
Chromosome: chr02 Position: 14118245 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
---|---|---|---|
All | 1415 | 93.85% | 6.15% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 493 | 85.40% | 14.60% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 334 | 87.72% | 12.28% |
Tropical Japonica | 94 | 96.81% | 3.19% |
Japonica Intermediate | 65 | 56.92% | 43.08% |
Group VI/Aromatic | 14 | 21.43% | 78.57% |
Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0214118245 | A->C | INTERGENIC | None |