Detailed information of SNP:
|
SNP ID:
sf0216755208(Gbrowse)
Chromosome: chr02 Position: 16755208 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1369 | 91.45% | 8.55% |
| All Indica | 762 | 85.96% | 14.04% |
| All Japonica | 491 | 99.59% | 0.41% |
| Aus | 64 | 96.88% | 3.12% |
| Indica I | 348 | 79.60% | 20.40% |
| Indica II | 209 | 94.74% | 5.26% |
| Indica Intermediate | 205 | 87.80% | 12.20% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 89 | 98.88% | 1.12% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 84.21% | 15.79% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0216755208 | G->A | INTERGENIC | None |