Detailed information of SNP:
|
SNP ID:
sf0216756135(Gbrowse)
Chromosome: chr02 Position: 16756135 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1274 | 91.84% | 8.16% |
| All Indica | 657 | 84.63% | 15.37% |
| All Japonica | 494 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 325 | 89.54% | 10.46% |
| Indica II | 168 | 82.74% | 17.26% |
| Indica Intermediate | 164 | 76.83% | 23.17% |
| Temperate Japonica | 333 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0216756135 | G->A | INTERGENIC | None |