Detailed information of SNP:
SNP ID:
sf0216950752(Gbrowse)
Chromosome: chr02 Position: 16950752 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1419 | 70.89% | 29.11% |
All Indica | 799 | 49.19% | 50.81% |
All Japonica | 497 | 99.40% | 0.60% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 62.13% | 37.87% |
Indica II | 213 | 44.60% | 55.40% |
Indica Intermediate | 211 | 30.81% | 69.19% |
Temperate Japonica | 335 | 99.40% | 0.60% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0216950752 | A->G | INTERGENIC | None |