Detailed information of SNP:



SNP ID: sf0217027817(Gbrowse)

Chromosome: chr02

Position: 17027817
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1416 84.46% 15.54%
All Indica797 79.17% 20.83%
All Japonica497 99.80% 0.20%
Aus67 34.33% 65.67%
Indica I374 73.80% 26.20%
Indica II212 72.17% 27.83%
Indica Intermediate211 95.73% 4.27%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 85.71% 14.29%
Intermediate41 82.93% 17.07%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0217027817 G->A INTERGENIC None