Detailed information of SNP:
|
SNP ID:
sf0217064611(Gbrowse)
Chromosome: chr02 Position: 17064611 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 52.12% | 47.88% |
| All Indica | 798 | 24.56% | 75.44% |
| All Japonica | 497 | 91.75% | 8.25% |
| Aus | 67 | 71.64% | 28.36% |
| Indica I | 375 | 29.60% | 70.40% |
| Indica II | 213 | 32.39% | 67.61% |
| Indica Intermediate | 210 | 7.62% | 92.38% |
| Temperate Japonica | 335 | 97.61% | 2.39% |
| Tropical Japonica | 94 | 73.40% | 26.60% |
| Japonica Intermediate | 68 | 88.24% | 11.76% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 59.52% | 40.48% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0217064611 | G->A | INTERGENIC | None |