Detailed information of SNP:
|
SNP ID:
sf0217064753(Gbrowse)
Chromosome: chr02 Position: 17064753 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 70.52% | 29.48% |
| All Indica | 791 | 50.82% | 49.18% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 63.34% | 36.66% |
| Indica II | 210 | 48.10% | 51.90% |
| Indica Intermediate | 210 | 31.43% | 68.57% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 21.43% | 78.57% |
| Intermediate | 42 | 71.43% | 28.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0217064753 | G->A | INTERGENIC | None |