Detailed information of SNP:
|
SNP ID:
sf0217631764(Gbrowse)
Chromosome: chr02 Position: 17631764 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1360 | 87.06% | 12.94% |
| All Indica | 742 | 76.82% | 23.18% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 95.45% | 4.55% |
| Indica I | 353 | 83.57% | 16.43% |
| Indica II | 195 | 69.74% | 30.26% |
| Indica Intermediate | 194 | 71.65% | 28.35% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0217631764 | G->A | INTERGENIC | None |