Detailed information of SNP:



SNP ID: sf0217762667(Gbrowse)

Chromosome: chr02

Position: 17762667
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1411 56.27% 43.73%
All Indica791 88.24% 11.76%
All Japonica497 1.01% 98.99%
Aus67 91.04% 8.96%
Indica I370 86.76% 13.24%
Indica II212 83.96% 16.04%
Indica Intermediate209 95.22% 4.78%
Temperate Japonica335 0.60% 99.40%
Tropical Japonica94 1.06% 98.94%
Japonica Intermediate68 2.94% 97.06%
Group VI/Aromatic14 50.00% 50.00%
Intermediate42 54.76% 45.24%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0217762667 A->G INTERGENIC None