Detailed information of SNP:
|
SNP ID:
sf0218618163(Gbrowse)
Chromosome: chr02 Position: 18618163 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 84.10% | 15.90% |
| All Indica | 797 | 75.16% | 24.84% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 62.12% | 37.88% |
| Indica I | 373 | 69.97% | 30.03% |
| Indica II | 213 | 89.20% | 10.80% |
| Indica Intermediate | 211 | 70.14% | 29.86% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0218618163 | G->A | INTERGENIC | None |