Detailed information of SNP:



SNP ID: sf0218941133(Gbrowse)

Chromosome: chr02

Position: 18941133
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 88.02% 11.98%
All Indica799 98.62% 1.38%
All Japonica497 69.42% 30.58%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 96.24% 3.76%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 90.75% 9.25%
Tropical Japonica94 9.57% 90.43%
Japonica Intermediate68 47.06% 52.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0218941133 G->A INTERGENIC None