Detailed information of SNP:
|
SNP ID:
sf0219035208(Gbrowse)
Chromosome: chr02 Position: 19035208 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1351 | 93.12% | 6.88% |
| All Indica | 775 | 92.90% | 7.10% |
| All Japonica | 460 | 100.00% | 0.00% |
| Aus | 62 | 43.55% | 56.45% |
| Indica I | 353 | 84.99% | 15.01% |
| Indica II | 212 | 99.53% | 0.47% |
| Indica Intermediate | 210 | 99.52% | 0.48% |
| Temperate Japonica | 321 | 100.00% | 0.00% |
| Tropical Japonica | 79 | 100.00% | 0.00% |
| Japonica Intermediate | 60 | 100.00% | 0.00% |
| Group VI/Aromatic | 13 | 92.31% | 7.69% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0219035208 | G->A | INTERGENIC | None |