Detailed information of SNP:
SNP ID:
sf0220096255(Gbrowse)
Chromosome: chr02 Position: 20096255 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 88.65% | 11.35% |
All Indica | 799 | 86.23% | 13.77% |
All Japonica | 497 | 99.60% | 0.40% |
Aus | 67 | 37.31% | 62.69% |
Indica I | 375 | 90.40% | 9.60% |
Indica II | 213 | 70.89% | 29.11% |
Indica Intermediate | 211 | 94.31% | 5.69% |
Temperate Japonica | 335 | 99.70% | 0.30% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0220096255 | G->A | INTERGENIC | None |