Detailed information of SNP:
SNP ID:
sf0220689191(Gbrowse)
Chromosome: chr02 Position: 20689191 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1408 | 94.96% | 5.04% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 487 | 87.27% | 12.73% |
Aus | 66 | 92.42% | 7.58% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 331 | 85.50% | 14.50% |
Tropical Japonica | 93 | 92.47% | 7.53% |
Japonica Intermediate | 63 | 88.89% | 11.11% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0220689191 | A->G | INTERGENIC | None |