Detailed information of SNP:



SNP ID: sf0220689191(Gbrowse)

Chromosome: chr02

Position: 20689191
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1408 94.96% 5.04%
All Indica799 100.00% 0.00%
All Japonica487 87.27% 12.73%
Aus66 92.42% 7.58%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica331 85.50% 14.50%
Tropical Japonica93 92.47% 7.53%
Japonica Intermediate63 88.89% 11.11%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0220689191 A->G INTERGENIC None