Detailed information of SNP:
|
SNP ID:
sf0221426073(Gbrowse)
Chromosome: chr02 Position: 21426073 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1351 | 69.13% | 30.87% |
| All Indica | 798 | 98.87% | 1.13% |
| All Japonica | 433 | 12.01% | 87.99% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 98.93% | 1.07% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 210 | 98.57% | 1.43% |
| Temperate Japonica | 294 | 14.29% | 85.71% |
| Tropical Japonica | 79 | 8.86% | 91.14% |
| Japonica Intermediate | 60 | 5.00% | 95.00% |
| Group VI/Aromatic | 14 | 14.29% | 85.71% |
| Intermediate | 39 | 64.10% | 35.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0221426073 | G->A | INTERGENIC | None |