Detailed information of SNP:
|
SNP ID:
sf0221669346(Gbrowse)
Chromosome: chr02 Position: 21669346 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 97.10% | 2.90% |
| All Indica | 796 | 95.35% | 4.65% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 64 | 95.31% | 4.69% |
| Indica I | 374 | 94.39% | 5.61% |
| Indica II | 212 | 97.64% | 2.36% |
| Indica Intermediate | 210 | 94.76% | 5.24% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0221669346 | G->A | INTERGENIC | None |