Detailed information of SNP:
|
SNP ID:
sf0221694106(Gbrowse)
Chromosome: chr02 Position: 21694106 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1398 | 96.71% | 3.29% |
| All Indica | 790 | 94.68% | 5.32% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 57 | 96.49% | 3.51% |
| Indica I | 372 | 96.77% | 3.23% |
| Indica II | 209 | 88.04% | 11.96% |
| Indica Intermediate | 209 | 97.61% | 2.39% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0221694106 | G->A | INTERGENIC | None |