Detailed information of SNP:
|
SNP ID:
sf0221757968(Gbrowse)
Chromosome: chr02 Position: 21757968 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1395 | 98.21% | 1.79% |
| All Indica | 779 | 96.79% | 3.21% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 65 | 100.00% | 0.00% |
| Indica I | 369 | 100.00% | 0.00% |
| Indica II | 203 | 89.66% | 10.34% |
| Indica Intermediate | 207 | 98.07% | 1.93% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0221757968 | G->A | INTERGENIC | None |