Detailed information of SNP:



SNP ID: sf0221876990(Gbrowse)

Chromosome: chr02

Position: 21876990
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1337 97.23% 2.77%
All Indica798 99.75% 0.25%
All Japonica419 91.89% 8.11%
Aus67 100.00% 0.00%
Indica I374 99.47% 0.53%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica284 89.08% 10.92%
Tropical Japonica79 100.00% 0.00%
Japonica Intermediate56 94.64% 5.36%
Group VI/Aromatic14 100.00% 0.00%
Intermediate39 97.44% 2.56%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0221876990 G->A INTERGENIC None