Detailed information of SNP:



SNP ID: sf0222195357(Gbrowse)

Chromosome: chr02

Position: 22195357
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1417 96.68% 3.32%
All Indica798 96.87% 3.13%
All Japonica497 98.39% 1.61%
Aus66 83.33% 16.67%
Indica I375 94.40% 5.60%
Indica II213 99.53% 0.47%
Indica Intermediate210 98.57% 1.43%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 91.49% 8.51%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0222195357 C->T INTERGENIC None