Detailed information of SNP:
SNP ID:
sf0222575255(Gbrowse)
Chromosome: chr02 Position: 22575255 |
Major allele:
T
Minor allele: A Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1417 | 98.45% | 1.55% |
All Indica | 797 | 97.99% | 2.01% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 91.04% | 8.96% |
Indica I | 375 | 99.47% | 0.53% |
Indica II | 212 | 99.06% | 0.94% |
Indica Intermediate | 210 | 94.29% | 5.71% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0222575255 | T->A | INTERGENIC | None |