Detailed information of SNP:



SNP ID: sf0222575255(Gbrowse)

Chromosome: chr02

Position: 22575255
Major allele: T

Minor allele: A

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of A(minor allele)
All1417 98.45% 1.55%
All Indica797 97.99% 2.01%
All Japonica497 100.00% 0.00%
Aus67 91.04% 8.96%
Indica I375 99.47% 0.53%
Indica II212 99.06% 0.94%
Indica Intermediate210 94.29% 5.71%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0222575255 T->A INTERGENIC None