Detailed information of SNP:



SNP ID: sf0222614293(Gbrowse)

Chromosome: chr02

Position: 22614293
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 97.46% 2.54%
All Indica799 95.62% 4.38%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 85.92% 14.08%
Indica Intermediate211 97.63% 2.37%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0222614293 C->A INTERGENIC None