Detailed information of SNP:



SNP ID: sf0222623240(Gbrowse)

Chromosome: chr02

Position: 22623240
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1419 94.64% 5.36%
All Indica799 96.75% 3.25%
All Japonica497 99.80% 0.20%
Aus67 34.33% 65.67%
Indica I375 99.20% 0.80%
Indica II213 94.84% 5.16%
Indica Intermediate211 94.31% 5.69%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 85.71% 14.29%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0222623240 A->C INTERGENIC None