Detailed information of SNP:
|
SNP ID:
sf0223751547(Gbrowse)
Chromosome: chr02 Position: 23751547 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 90.76% | 9.24% |
| All Indica | 797 | 84.69% | 15.31% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 91.04% | 8.96% |
| Indica I | 375 | 82.40% | 17.60% |
| Indica II | 212 | 92.45% | 7.55% |
| Indica Intermediate | 210 | 80.95% | 19.05% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0223751547 | G->A | INTERGENIC | None |