Detailed information of SNP:



SNP ID: sf0224203555(Gbrowse)

Chromosome: chr02

Position: 24203555
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 97.39% 2.61%
All Indica799 99.00% 1.00%
All Japonica496 94.15% 5.85%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 96.68% 3.32%
Temperate Japonica334 93.41% 6.59%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 89.71% 10.29%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0224203555 G->A INTERGENIC None